Keerthana Nagesh Prabhu

Bioinformatics Research Analyst
cfDNA • Epigenomics • Neuro-Oncology • ONT Sequencing • Machine Learning • Cloud Genomics

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About Me

Graduation
Graduation Day
Lab Work
Performing cfDNA extraction
Field Visit
Sound Agriculture field visit

I am a Bioinformatics Research Analyst at Washington University in St. Louis working at the intersection of cancer genomics, epigenomics, and computational biology.

My current research focuses on developing analytical approaches for cell-free DNA (cfDNA) based liquid biopsies for brain tumors using fragmentomics, methylation profiling, and multi-omics integration.

Across academia and industry, I have built bioinformatics software tools, large-scale cloud genomics workflows, and analytical pipelines supporting translational cancer research, plant genomics, and precision medicine initiatives.

Research Interests

Cell-Free DNA Cancer Genomics Epigenomics Fragmentomics Brain Tumors EM-seq ONT Sequencing Machine Learning Cloud Computing Liquid Biopsy

Highlights

  • Bioinformatics Research Analyst, Washington University in St. Louis
  • 4 publications and conference abstracts
  • AWS Certified Cloud Practitioner
  • Built cloud genomics workflows processing >50 TB of sequencing data
  • Co-developed the sounDMR ONT methylation analysis package
  • Research experience spanning academia, healthcare, biotechnology, and agriculture